[ Journal articles | Editorials | Letters | Proceedings and book chapters | Technical reports | Dissertation | Home page ]
To appear | Hill M, Broman KW, Stupka E, Smith WC, Jiang D, Sidow A.
The C. savignyi genetic map and its integration with the reference sequence facilitates insights into chordate genome evolution. Genome Res, to appear [PubMed | pdf (1.0M)] |
| Paigen K, Szatkiewicz JP, Sawyer K, Leahy N, Parvanov ED, Ng S, Graber JH, Broman KW, Petkov PM. The recombinational anatomy of a mouse chromosome. PLoS Genet, to appear | |
| Lupi I, Broman KW, Tzuo S-C, Gutenberg A, Martino E, Caturegli P. Novel autoantigens in autoimmune hypophysitis. Clin Endocrinol, to appear [PubMed | pdf (955k)] | |
2008 | Bjornsson HT, Albert TJ, Ladd-Acosta CM, Green RD, Rongione MA,
Middle CM, Irizarry RA, Broman KW, Feinberg AP (2008) SNP-specific array-based allele-specific expression analysis. Genome Res 18:771-779 |
| Peirce JL, Broman KW, Lu L, Chesler EJ,
Zhou G, Airey DC, Birmingham AE, Williams RW (2008) Genome Reshuffling for Advanced Intercross Permutation (GRAIP): Simulation and permutation for advanced intercross population analysis. PLoS ONE 3(4):e1977 [PubMed | pdf (468k)] | |
| Roy-Gagnon M-H, Mathias RA, Fallin MD, Jee SH, Broman KW, Wilson AF (2008) An extension of the
regression of offspring on mid-parent to test for association and
estimate locus-specific heritability: The revised ROMP method.
Ann Hum Genet 72:115-125 [PubMed | pdf (519k)] | |
| Sinha D, Klise A, Sergeev Y, Hose S, Bhutto IA,
Hackler L, Malpic-Ilanos T, Samtani S, Grebe R, Goldberg MF,
Hejtmancik JF, Nath A, Zack DJ, Fariss RN, McLeod DS, Sundin O, Broman KW, Lutty GA, Zigler JS
Jr (2008) βA3/A1-crystallin in astroglial cells regulates retinal
vascular remodeling during development. Mol
Cell Neurosci 37:85-95 [PubMed | pdf (2.3M)] | |
2007 | Rajagopal SK, Ma Q, Obler D, Shen J, Manichaikul A,
Tomita-Mitchell A, Boardman K, Briggs C, Garg V, Srivastava D,
Goldmuntz E, Broman KW, Benson DW,
Smoot LB, Pu, WT (2007) Spectrum of heart disease associated with murine
and human GATA4 mutation. J Mol
Cell Cardiol 43:677-685 [PubMed | pdf (1.2M)] |
| Manichaikul A, Palmer AA, Sen Ś, Broman KW (2007) Significance thresholds for
quantitative trait locus mapping under selective genotyping.
Genetics 177:1963-1966
[PubMed | pdf (93k)] | |
| Petkov PM, Broman KW,
Szatkiewicz JP, Paigen K (2007) Crossover interference underlies sex
differences in recombination rates. Trends Genet 23:539-542 [PubMed | pdf (266k) | Supplementary material (pdf 225k)] | |
| Peirce JL, Broman KW, Lu L, Williams RW (2007) A simple method for combining genetic mapping data from multiple crosses and experimental designs. PLoS ONE 2(10):e1036 [PubMed | pdf (215k)] | |
| Teuscher F, Broman KW (2007)
Haplotype probabilities for multiple-strain recombinant inbred lines.
Genetics 175:1267-1274 [PubMed | pdf (722k)] | |
| Sen Ś, Satagopan JM, Broman KW, Churchill GA (2007) R/qtlDesign: Inbred
line cross experimental design. Mamm
Genome 18:87-93 [PubMed | pdf (138k)] | |
| Lemmerhirt HL, Broman
KW, Shavit JA, Ginsburg D (2007) Genetic regulation of plasma von
Willebrand factor levels: quantitative trait loci analysis in a mouse model. J Thromb
Haemost 5:329-335 [PubMed | pdf (1.1M)] | |
| Nichols KM, Broman KW, Sundin K, Young JM,
Wheeler PA, Thorgaard GH (2007) Quantitative trait loci by maternal
cytoplasmic environment interaction for development rate in Oncorhynchus
mykiss. Genetics 175:335-347 [PubMed | pdf (1035k)] | |
2006 | Broman KW, Sen Ś, Owens SE,
Manichaikul A, Southard-Smith EM, Churchill GA (2006) The X chromosome
in quantitative trait locus mapping. Genetics 174:2151-2158 [PubMed | pdf (169k)] |
| Shrestha S, Smith MW, Broman KW,
Farzadegan H, Vlahov D, Strathdee SA (2006)
Multi-person-use of syringes among injection drug users in a needle
exchange program: A gene based molecular epidemiological analysis.
J Acquir Immune Defic Syndr
43:335-343 [PubMed | pdf (174k)] | |
| Kess D, Lindqvist AK, Peters T, Wang H, Zamek J,
Nischt R, Broman KW, Blakytny R, Krieg
T, Holmdahl R, Scharffetter-Kochanek K (2006) Identification of
susceptibility loci for skin disease in a murine psoriasis model.
J Immunol 177:4612-4619 [PubMed | pdf (211k)] | |
| Manichaikul A, Dupuis J, Sen Ś, Broman KW (2006) Poor performance of bootstrap
confidence intervals for the location of a quantitative trait
locus. Genetics 174:481-489 [PubMed | pdf (1033k)] | |
| Sundin OH, Broman KW,
Chang HH, Vito ECL, Stark WJ, Gottsch JD (2006)
A common locus for late-onset Fuchs corneal dystrophy
maps to 18q21.2-q21.32.
Invest Ophthalmol Vis Sci
47:3919-3926 [PubMed | pdf (631k)] | |
| Feenstra B, Skovgaard IM, Broman KW (2006) Mapping quantitative trait loci
by an extension of the Haley-Knott regression method using estimating
equations. Genetics 173:2269-2282 [PubMed | pdf (290k)] | |
| Chadwick LH, Pertz L, Broman
KW, Bartolomei MS, Willard HF (2006) Genetic control of X
chromosome inactivation in mice: definition of the Xce candidate
interval. Genetics 173:2111-2119 [PubMed | pdf (193k)] | |
| Grant GG, Robinson SW, Edwards RE, Clothier B, Davies R, Judah DJ,
Broman KW, Smith AG (2006)
Multiple polymorphic genes determine 'normal' hepatic and splenic iron
status in mice. Hepatology 44:174-185 [PubMed | pdf (902k)] | |
| Orgogozo V, Broman KW,
Stern DL (2006)
High-resolution QTL mapping reveals sign epistasis controlling
ovariole number between two Drosophila species. Genetics 173:197-205 [PubMed | pdf (425k)] | |
| Shrestha S, Strathdee SA, Broman KW,
Smith MW (2006) Unknown biological
mixtures evaluation using STR analytical quantification.
Electrophoresis
27:409-415 [PubMed | pdf (125k)] | |
| Reilly KM, Broman KW, Bronson RT,
Tsang S, Loisel DA, Christy ES, Sun Z, Diehl J, Munroe DJ, Tuskan RG
(2006) An imprinted locus epistatically influences Nstr1 and
Nstr2 to control resistance to nerve sheath tumors in a
neurofibromatosis type 1 mouse model. Cancer Res 66:62-68 [PubMed | pdf (1.9M)] | |
| Sundin OH, Jun AS, Broman KW, Liu SH, Sheehan SE, Vito ECL, Stark WJ,
Gottsch JD (2006)
Linkage of late-onset Fuchs corneal dystrophy
to a novel locus at 13pTel-13q12.13.
Invest Ophthalmol Vis Sci 47:140-145 [PubMed | pdf (316k)] | |
2005 | Sundin OH, Leppert GS, Silva ED, Yang J-M, Dharmaraj S, Maumenee
IH, Santos LC, Parsa CF, Traboulsi EI, Broman KW, DiBernardo C, Sunness JS, Toy J,
Weinberg EM (2005) Extreme hyperopia is the result of null mutations in MFRP,
which encodes a Frizzled-related protein.
Proc Natl Acad Sci USA 102:9553-9558 [PubMed | pdf (859k)] |
| Gottsch JD, Sundin OH, Liu SH, Jun AS, Broman KW, Stark WJ, Vito EC, Narang AK,
Thompson JM, Magovern M (2005) Inheritance of a novel COL8A2 mutation defines a distinct early-onset subtype of Fuchs corneal dystrophy. Invest Ophthalmol Vis Sci 46:1934-1939 [PubMed | pdf (302k)] | |
| Owens SE, Broman KW,
Wiltshire T, Elmore JB, Bradley KM, Smith JR, Southard-Smith EM (2005)
Genome-wide linkage identifies novel modifier loci of aganglionosis
in the Sox10Dom model of Hirschsprung
disease. Hum Mol Genet 14:1549-1558 [PubMed | pdf (304k)] | |
| Broman KW (2005) The genomes of
recombinant inbred lines. Genetics 169:1133-1146 [PubMed | pdf (525k) | Related software | Corrigendum: Genetics 173:2419, 2006 (pdf 30k)] | |
| Guler ML, Ligons DL, Wang Y, Bianco M, Broman
KW, Rose NR (2005) Two autoimmune diabetes loci influencing T
cell apoptosis control susceptibility to experimental autoimmune
myocarditis. J Immunol 174:2167-2173 [PubMed | pdf (165k)] | |
| Congdon N, Broman KW, Lai H, Munoz B, Bowie H, Gilbert D,
Wojciechowski R, West SK (2005) Cortical, but not posterior
subcapsular, cataract shows significant familial aggregation in an
older population after adjustment for possible shared environmental
factors. Ophthalmology 112:73-77 [PubMed | pdf (118k)] | |
| Chen WM, Broman KW, Liang KY (2005) Power
and robustness of linkage tests for quantitative traits in general
pedigrees. Genet
Epidemiol 28:11-23 [PubMed | pdf (160k)] | |
2004 | Boyadjiev SA, Dodson JL, Radford CL, Ashrafi GH, Beaty TH, Mathews
RI, Broman KW, Gearhart JP (2004)
Clinical and molecular characterization of the bladder
exstrophy-epispadias complex: analysis of 232 families. BJU
International 94:1337-1343 Note: The publisher requires that I make the following statement: "This is an electronic version of an article published in BJU International: complete citation information for the final version of the paper, as published in the print edition of BJU International, is available on the Blackwell Synergy online delivery service, accessible via the journals website at www.blackwellpublishing.com/BJU or www.blackwell-synergy.com." [PubMed | pdf (168k)] |
| The Complex Trait Consortium [113 authors] (2004) The
Collaborative Cross, a community resource for the genetic analysis of
complex traits. Nat Genet 36:1133-1137 [PubMed | pdf (177k)] | |
| Chen S, Wang W, Broman KW,
Katki HA, Parmigiani G (2004) BayesMendel: an R environment for Mendelian risk
prediction. Stat Appl Genet
Mol Biol 3(1): article 21 [PubMed | pdf (191k)] | |
| Neff MW, Robertson KR, Wong AK, Safra N, Broman KW, Slatkin M, Mealey KL, Pedersen NC (2004)
Breed distribution and history of canine mdr1-1Δ, a pharmacogenetic
mutation that marks the emergence of breeds from the collie lineage.
Proc Natl Acad Sci USA 101:11725-11730 [PubMed | pdf (312k) | Supporting info] | |
| Tankersley CG, Broman KW (2004)
Interactions in hypoxic and hypercapnic breathing
are genetically linked to mouse chromosomes 1 and 5. J Appl Physiol 97:77-84 [PubMed | pdf (206k)] | |
| Congdon N, Broman KW, Lai H, Munoz B,
Bowie H, Gilbert D, Wojciechowski R, Alston C, West SK (2004) Nuclear
cataract shows significant familial aggregation in an older population
after adjustment for possible shared environmental factors. Invest Ophthalmol Vis Sci 45:2182-2186
[PubMed | pdf (90k)] | |
|
Tankersley CG, Campen M, Bierman A, Flanders SE, Broman KW, Rabold R (2004) Particle effects on
heart-rate regulation in senescent mice. Inhal Toxicol 16:381-390 [PubMed | pdf (472k)] | |
| Sivagnanasundaram S, Broman KW, Liu M,
Petronis A (2004) Quasi-linkage: a confounding factor in linkage analysis of
complex diseases? Hum
Genet 114:588-593 [PubMed | pdf (149k) | Data] | |
| Chen WM, Broman KW, Liang KY (2004)
Quantitative trait linkage analysis by generalized estimating
equations: Unification of variance components and Haseman-Elston
regression. Genet
Epidemiol 26:265-272 [PubMed | pdf (131k)] | |
| Kieffer TL, Finucane MM, Nettles RE, Quinn TC, Broman KW, Ray SC,
Persaud D, Siliciano RF (2004) Genotypic analysis of HIV-1 drug
resistance at the limit of detection: Virus production without
evolution in treated adults with undetectable HIV loads. J Infect Dis 189:1452-1456 [PubMed | pdf (1270k)] | |
2003 | Lidman O, Swanberg M, Horvath L, Broman
KW, Olsson T, Piehl F (2003) Discrete gene loci regulate
neurodegeneration, lymphocyte infiltration and major
histocompatibility complex class II expression in the CNS. J Neurosci 23:9817-9823 [PubMed | pdf (477k)] |
| Glaser RL, Broman KW, Shulman RL,
Eskenazi B, Wyrobek AJ, Jabs EW (2003) The paternal age effect in Apert
syndrome is due in part to the increased frequency of mutations in
sperm. Am J Hum
Genet 73:939-947 [PubMed | pdf (321k)] | |
| Denny P, Hopes E, Gingles N, Broman
KW, McPheat W, Morten J, Alexander J, Andrew PW, Brown SDM (2003) A
major locus conferring susceptibility to infection by Streptococcus
pneumoniae in mice. Mamm
Genome 14:448-453 [PubMed | pdf (154k)] | |
| Lamichhane G, Zignol M, Blades NJ, Geiman DE, Dougherty A, Broman KW, Bishai WR (2003) A post-genomic method
for predicting essential genes at subsaturation levels of mutagenesis:
application to Mycobacterium tuberculosis. Proc Natl Acad Sci USA 100:7213-7218 [PubMed | pdf (260k) | software | related technical report (pdf 360k)] | |
| Broman KW, Wu H, Sen Ś, Churchill
GA (2003) R/qtl: QTL mapping in experimental crosses.
Bioinformatics 19:889-890
[PubMed | pdf (236k) | screen pdf (288k) | software] | |
| Broman KW (2003) Mapping quantitative trait loci
in the case of a spike in the phenotype distribution. Genetics 163:1169-1175 [PubMed | pdf (250k)] | |
| Becanovic K, Wallstrom E, Kornek B, Glaser A, Broman KW, Dahlman I, Olofsson P, Holmdahl R,
Luthman H, Lassmann H, Olsson T (2003) New loci regulating rat myelin
oligodendrocyte glycoprotein-induced experimental autoimmune
encephalomyelitis. J Immunol
170:1062-1069 [PubMed | pdf (208k)] | |
2002 | Broman KW, Speed TP (2002) A model
selection approach for the identification of quantitative trait loci
in experimental crosses (with discussion). J Roy Stat Soc
B 64:641-656, 731-775 [Abstract | pdf (326k) | discussion (519k) | software] |
| Jun AS, Broman KW, Do DV, Akpek EK,
Stark WJ, Gottsch JD (2002) Endothelial dystrophy, iris hypoplasia,
congenital cataract, and stromal thinning (EDICT) syndrome maps to
chromosome 15q22.1-q25.3. Am J Ophthalmol 134:172-176 [PubMed | pdf (189k)] | |
| Broman KW, Rowe LB, Churchill GA,
Paigen K (2002) Crossover interference in the mouse. Genetics
160:1123-1131 [PubMed | pdf (165k)] | |
2001 | Hunter KW, Broman KW, Le Voyer T,
Lukes L, Cozma D, Debies MT, Rouse J, Welch DR (2001)
Predisposition to efficient mammary tumor metastatic progression is
linked to the breast cancer metastasis suppressor gene Brms1.
Cancer
Research 61:8866-8872 [PubMed | pdf (314k)] |
| Ravenel JD, Broman KW, Perlman EJ,
Niemitz EL, Jayawardena TM,
Bell DW, Haber DA, Uejima H, Feinberg AP (2001) Loss of imprinting of
Insulin-Like Growth Factor-II (IGF2) gene in distinguishing specific
biologic subtypes of Wilms tumor.
J Natl Cancer Inst 93:1698-1703 [PubMed | pdf (330k)] | |
| Broman KW (2001) Review of
statistical methods for QTL mapping in experimental crosses.
Lab
Animal 30(7):44-52 Note: The publisher requires that I make the following statement: "The paper can only be downloaded for personal study use and cannot be copied for commercial purposes without the permission of the publisher." [PubMed | pdf (1.1M)] | |
| Broman KW (2001) Estimation of allele frequencies with data on
sibships. Genet Epidemiol 20:307-315 [PubMed | pdf (48k) | Erratum: Genet Epidemiol 23:465-466, 2002 (pdf 56k)] | |
| Giglio S, Broman KW, Matsumoto N,
Calvari V, Gimelli G, Neumann T, Ohashi H, Voullaire L, Larizza D,
Giorda R, Weber JL, Ledbetter DH, Zuffardi O (2001) Olfactory
receptor-gene clusters, genomic-inversion polymorphisms, and
common chromosome rearrangements. Am J Hum Genet 68:874-883 [PubMed | pdf (1494k)] | |
| Boyartchuk VL, Broman KW, Mosher RE,
D'Orazio SEF, Starnbach MN, Dietrich WF (2001) Multigenic control of
Listeria monocytogenes susceptibility in mice. Nat Genet 27:259-260 [PubMed | pdf (609k) | methods (pdf 113k) | figure A (pdf 13k) | related technical report (pdf 62k)] | |
| Yu A, Zhao C, Fan Y, Jang W, Mungall AJ, Deloukas P, Olsen A,
Doggett NA, Ghebranious N, Broman KW, Weber JL (2001)
Comparison of human genetic and sequence-based physical maps. Nature
409:951-953 [PubMed | pdf (129k)] | |
| Lichter-Konecki U, Broman KW, Blau EB, Konecki DS (2001) Genetic
and physical mapping of the locus for autosomal dominant renal Fanconi
syndrome, on chromosome 15q15.3 Am J Hum Genet 68: 264-268 [PubMed | pdf (636k)] | |
2000 | Kissebah AH, Sonnenberg GE, Myklebust J, Goldstein M, Broman K,
James RG, Marks JA, Krakower GR, Jacob HJ, Weber J, Martin L, Blangero
J, Comuzzie AG (2000) Quantitative trait loci on chromosomes 3 and 17
influence phenotypes of the metabolic syndrome. Proc Natl Acad Sci
USA 97:14478-14483 [PubMed | pdf (200k)] |
| Witte JS, Goddard KAB, Conti DV, Elston RC, Lin J, Suarez BK,
Broman KW, Burmester JK, Weber JL, Catalona WJ (2000) Genomewide scan
for prostate cancer-aggressiveness loci. Am J Hum Genet 67:92-99 [PubMed | pdf (243k)] | |
| Broman KW, Weber JL (2000) Characterization of human crossover
interference. Am J Hum Genet 66:1911-1926 [PubMed | pdf (291k)] Expanded version of tables 1-2 [pdf.zip (20k) | ps.Z (32k)] Expanded version of figure 3 [pdf.zip (313k) | ps.Z (318k)] | |
| Suarez BK, Lin J, Burmester JK, Broman KW, Weber JL, Banerjee TK,
Goddard KAB, Witte JS, Elston RC, Catalona WJ (2000) A genome
screen of multiplex prostate cancer sibships. Am J Hum Genet 66:933-944 [PubMed | pdf (291k)] | |
| Brown AS, Feingold E, Broman KW, Sherman SL (2000) Genome-wide
variation in recombination in female meiosis: A risk factor for
non-disjunction of chromosome 21. Hum Mol Genet
9:515-523 [PubMed | pdf (196k)] | |
1999 | Broman KW, Weber JL (1999) Long homozygous chromosomal
segments in reference families from the Centre d'Étude du
Polymorphisme Humain. Am J Hum Genet 65:1493-1500 [PubMed | pdf (202k) | Supplemental table (pdf 28k) | Errata] Related editorial by AG Clark [pdf (133k)] |
| Broman KW, Weber JL (1999) Method for constructing
confidently ordered linkage maps. Genet Epidemiol 16:337-343 [PubMed | pdf (51k) | Build your own map] | |
| Neff MW, Broman KW, Mellersh CS, Ray K, Acland GM, Aguirre GD,
Ziegle JS, Ostrander EA, Rine J (1999) A
second-generation genetic linkage map of the domestic dog, Canis
familiaris. Genetics 151:803-820 [PubMed | pdf (262k) | Supplemental data] | |
1998 | Broman KW, Murray JC, Sheffield VC, White RL, Weber JL
(1998) Comprehensive human genetic maps: Individual and sex-specific
variation in recombination. Am J Hum Genet 63:861-869 [PubMed | pdf (534k) | Maps and data | Marker search | Supplemental data] |
| Broman K, Speed T, Tigges M (1998) Estimation of
antigen-responsive T cell frequencies in PBMC from human
subjects. Stat Sci 13:4-8 [Abstract | pdf (556k) | Data | R/npem software] | |
1996 | Broman K, Speed T, Tigges M (1996) Estimation of
antigen-responsive T cell frequencies in PBMC from human
subjects. J Immunol Meth 198:119-132 [PubMed | pdf (740k) | Data | R/npem software] |
| Dernburg AF, Broman KW, Fung JC, Marshall WF, Philips J,
Agard DA, Sedat JW (1996) Perturbation of nuclear architecture by
long-distance chromosome interactions. Cell 85:745-759 [PubMed | pdf (11,382k)] | |
Editorials | |
| Broman KW (2005) Mapping expression in
randomized rodent genomes. Nat
Genet 37:209-210 [PubMed | pdf (349k)] | |
| Broman KW, Feingold E (2004) SNPs made routine. Nat Methods 1:104-105 [PubMed | pdf (70k)] | |
Letters | |
| Sieberts SK, Broman KW, Gudbjartsson
DF (2004) "Biased towards the null" means reduced power. Am J Hum
Genet 75:720-722 (Response to Schork and Greedwood, Am J Hum Genet 74:306-316, 2004) [PubMed | pdf (60k)] | |
| Broman KW, Caffo BS (2003) Simulation-based
P values: Response to North et al. Am J Hum
Genet 72:496 (Response to North et al., Am J Hum Genet 71:439-441, 2002) [PubMed | pdf (93k)] | |
| Ravenel JD, Perlman EJ, Broman KW,
Feinberg AP (2002) Response: Re: Loss of imprinting of Insulin-Like
Growth Factor-II (IGF2) gene in distinguishing specific biologic
subtypes of Wilms tumor. J Natl Cancer
Inst 94:1809-1810 (Response to Morison et al., J Natl Cancer Inst 94:1809, 2002) [pdf (37k)] | |
| Broman KW, Weber JL (1998) Estimation of pairwise
relationships in the presence of genotyping errors. Am J Hum Genet
63:1563-1564 [PubMed | pdf (429k) | RelCheck software] | |
Proceedings and book chapters | |
|
Broman KW, Heath SC (2007) Managing and
manipulating genetic data. In: Barnes MR,
Gray IC (eds) Bioinformatics for Geneticists, 2nd edition,
Wiley, pp. 17-31 [Abstract | pdf (250k) | Wiley | Amazon] | |
| Broman KW, Matsumoto N, Giglio S,
Martin CL, Roseberry JA, Zuffardi O, Ledbetter DH, Weber JL (2003)
Common long human inversion polymorphism on chromosome 8p. In:
Goldstein DR (ed) Science and Statistics: A Festschrift for Terry
Speed. IMS Lecture Notes-Monograph Series, Vol 40, pp 237-245 [Abstract | pdf (139k)] | |
| Weber JL, Broman KW (2001) Genotyping for human whole-genome
scans: Past, present, and future. In: Rao DC, Province MA (eds)
Genetic Dissection of Complex Traits. Vol 42: Advances in Genetics.
Academic Press, New York, pp 77-96 [PubMed | pdf (3.2M) | Amazon] | |
| Broman KW (1999) Cleaning genotype data. In: Goldin L, Amos CI,
Chase GA, Goldstein AM, Jarvik GP, Martinez MM, Suarez BK, Weeks DE,
Wijsman EM, MacCluer JE. Genetics Workshop 11: Analysis of genetic and
environmental factors in common diseases. Genet Epidemiol
17(Supp 1):S79-S83 [Pubmed | pdf (95k)] | |
| Broman KW, Speed TP (1999) A review of methods for
identifying QTLs in experimental crosses. In: Seillier-Moiseiwitsch F
(ed) Statistics in Molecular Biology and Genetics. IMS Lecture
Notes-Monograph Series, Vol 33, pp 114-142 [Abstract | Amazon | pdf (249k) | ps.gz (74k) | R/qtl software | f2 software] | |
Technical reports | |
| Broman KW (2006) Use of hidden Markov models
for QTL mapping. Working paper 125, Department of Biostatistics,
Johns Hopkins University, Baltimore, MD [Abstract | pdf (94k)] | |
| Broman KW (2004) The
genomes of recombinant inbred lines: The gory details. Working paper
47, Department of Biostatistics, Johns Hopkins University, Baltimore, MD [Abstract | pdf (313k) | Published paper (pdf 525k) | Related software] | |
| Blades NJ, Broman KW (2002)
Estimating the number of essential genes in a genome by random
transposon mutagenesis. Technical Report MS02-20, Department of Biostatistics,
Johns Hopkins University, Baltimore, MD [Abstract | pdf (360k)] | |
| Broman KW, Boyartchuk VL, Dietrich WF (2000) Mapping
time-to-death quantitative trait loci in a mouse cross with high
survival rates. Technical Report MS00-04, Department of
Biostatistics, Johns Hopkins University, Baltimore, MD [Abstract | pdf (62k)] | |
| Broman K, Speed T, Tigges M (1996) Estimation of
antigen-responsive T cell frequencies in PBMC from human subjects.
Technical Report #454, Department of Statistics, University of
California, Berkeley [Abstract | pdf (388k) | ps.Z (169k) | Data | R/npem software] | |
| Bowman KO, Shenton LR, Kastenbaum MA, Broman K (1992)
Overdispersion: Notes on discrete distributions. Technical Report
ORNL/TM-12167, Oak Ridge National Laboratory [Abstract] | |
Dissertation | |
| Broman KW (1997) Identifying quantitative trait loci in
experimental crosses. PhD dissertation, Department of Statistics,
University of California, Berkeley [Abstract | pdf (653k) | ps.Z (297k) | R/qtl software | f2 software] | |
| Last modified: Tue Jun 10 15:28:38 2008 |