Recent Selected Publications

See my
cv or Google author profile for a full list

Newton, M.A., Q. He and C. Kendziorski. A model-based analysis to infer the functional content of a gene list. Statistical Applications in Genetics and Molecular Biology, Volume 11(2); Article 9, 2012.

Wang C.Y., D.S. Stapleton, K.L. Schueler, M.E. Rabaglia, A.T. Oler, M.P. Keller MP, C. Kendziorski, C., K.W. Broman, B.S. Yandell, E.E. Schadt, and A.D. Attie. Tsc2, a positional candidate gene underlying a quantitative trait locus for hepatic steatosis. Journal of Lipid Research 53(8):1493-1501, 2012.

Eng, K.E.*, S. Wang, W.H. Bradley, J.S. Rader, and C. Kendziorski. Pathway-Index Models for Construction of Patient-Specific Risk Profiles, Statistics in Medicine, [E-pub ahead of print] doi: 10.1002/sim.5641, 2012.

Dawson, J.A.*, S. Ye*, and C. Kendziorski. R/EBcoexpress: An R package for Discovering Differential Coexpression, Bioinformatics, Jul 15;28(14):1939-40, 2012.

Bagley, B.N., T.M. Keane, V.I. Maklakova, J.G. Marshall, R.A. Lester, M.M. Cancel, L.E. Bendzick, R.A. Been, S.C. Kogan, R.T.Cormier, C. Kendziorski, D.J. Adams, and L.S. Collier. A dominantly acting allele of Mcm4 causes chromosomal abnormalities and promotes leukemogenesis, PLOS Genetics, 8(11):e1003034, 2012.

Tu, Z., Keller, M.P., Zhang, C., Rabaglia, M.E., Greenawalt, D.M, Yang, X., Wang, I-M., Dai, H., Bruss, M.D. Lum, P.Y., Zhou ,Y-P., Kemp, D.M., Kendziorski, C., Yandell, B.S., Attie, A.D., Schadt, E.S., and Zhu, J. Integrative Analysis of a Cross-loci Regulation Network Identifies App as a Gene Regulating Insulin Secretion from Pancreatic Islets, PLOS Genetics 8(12):e1003107, 2012.

Leng, N.*, J.A. Dawson*, R. M. Stewart, V. Ruotti, A. Rissman, B. Smits, J. Haag, M.N. Gould, J.A. Thomson, and C. Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments, Bioinformatics 29(8), 1035-1043, 2013.

Anderson, S.A., Nizzi, C., Chang, Y.I., Deck, K.M., Schmidt, P., Galy, B. Broman, A.T., Kendziorski, C., Hentze, M.W., Fleming, M.D., Zhang, J., and Eisenstein, R.S. The IRP1-HIF-2α Axis: Coordinating Iron and Oxygen Sensing with Erythropoiesis and Iron Absorption, Cell Metabolism, 17(2):282-90. doi: 10.1016, 2013.

Smits, B., Haag, J.D., Rissman, A.I., Sharman, D., Tran, A., Schoenborn, A., Baird, R., Peiffer, D., Leinweber, M., Muelbl, M., Meilahn, A., Eichelberg, M.R., Leng, N.*, Kendziorski, C., Manorama, J., Powers, P., Alexander, C., and Gould, M.N.. The Gene Desert Mammary Carcinoma Susceptibility Locus Mcs1a Regulates Nr2f1 Modifying Mammary Epithelial Cell Differentiation and Proliferation. PLoS Genetics 9(6): e1003549. doi:10.1371/journal.pgen.1003549, 2013.

Ray, M., Goldstein, S., Zhou, S., Potamousis, K., Sarkar, D., Newton, M. A., Esterberg, E.*, Kendziorski, C., Bogler, O., and Schwartz, D. C. Discovery of structural alterations in solid tumor oligodendroglioma by single molecule analysis. BMC genomics, 14(1), 505, 2013.

Jiang, Y.Z., Wang, K., Li, Y., Dai, C.F., Wang, P*., Kendziorski, C., Chen, D.B., and Zheng, J. Transcriptionaland Functional Adaptations of Human Endothelial Cells to Physiological Chronic Low Oxygen. Biology of Reproduction 88(5), 2013.

Dawson, J.A*. S. Ye*, and and C. Kendziorski. Extending information retrieval methods to personalized genomic based studies of disease, submitted, 2013.

*Denotes CK student or postdoc