Colin Dewey's Home Page

2020.07.10: Manuscript submitted: "CellO: Comprehensive and hierarchical cell type classification of human cells with the Cell Ontology"
2020.06.12: Paper published in Genome Biology and Evolution: "Giant Island Mice Exhibit Widespread Gene Expression Changes in Key Metabolic Organs"
2019.12.12: Manuscript submitted: "Cell type specific gene expression profiling reveals a role for the complement component C3A in neutrophil migration to tissue damage"
2019.07.06: Book chapter published in Evolutionary Genomics: "Whole-genome alignment"
2019.05.13: Manuscript submitted: "PRAM: a novel pooling approach for discovering intergenic transcripts from large-scale RNA sequencing experiments"
2019.04.23: Paper published in PNAS: "Genome-wide effects on Escherichia coli transcription from ppGpp binding to its two sites on RNA polymerase"

2019.11.21: "Making the most of transcriptomic data"
CGSI seminar, Madison, WI
2019.05.20: "Teaching introductory bioinformatics with Jupyter notebook-based active learning"
Great Lakes Bioinformatics Conference (GLBIO), Madison, WI
2018.07.06: "Whole genome alignment"
ISMB 2018, Tutorial on "Computational methods for comparative genomics," Chicago, IL
2017.08.30: "Genome-wide characterization of RNA processing event dependencies"
Genome 10K and Genome Science Conference, Norwich, UK