Week | Date | Subject | |
1 | 1/24 | Course Overview | |
| 1/26 | Learning Motif Models | |
2 | 1/31 | Learning Motif Models | |
| 2/2 | Learning CRM Models | |
3 | 2/7 | Learning CRM Models | |
| 2/9 | ChIP-Seq (Guest Lecture - Sunduz Keles) | |
4 | 2/14 | Learning CRM Models | |
| 2/16 | Gene Finding | |
5 | 2/21 | Gene Finding | |
| 2/23 | Gene Finding | |
6 | 2/28 | Gene Finding | |
| 3/1 | RNA-Seq | Project Proposal Due |
7 | 3/6 | RNA-Seq | |
| 3/8 | RNA Secondary Structure and SCFGs | |
8 | 3/13 | RNA Secondary Structure and SCFGs | |
| 3/15 | RNA Secondary Structure and SCFGs | |
9 | 3/20 | RNA Secondary Structure and SCFGs | |
| 3/22 | Large-scale
alignment | |
10 | 3/27 | Large-scale
alignment | |
| 3/29 | Large-scale alignment
| Project Progress Report Due |
Spring Break |
11 | 4/10 | Regulatory
Network Evolution (Guest Lecture - Sushmita Roy) | |
| 4/12 | Comparative
Network Analysis | |
12 | 4/17 | Comparative
Network Analysis | |
| 4/19 | Protein
Structure Prediction | |
13 | 4/24 | Protein
Structure Prediction | |
| 4/26 | Biomedical
Text Mining (Guest lecture - Mark Craven) | |
14 | 5/1 | Genotype Analysis | |
| 5/3 | Genotype Analysis | |
15 | 5/8 | Genotype Analysis | |
| 5/10 | Genotype
Analysis | |