Biostatistics & Medical Informatics 776
Computer Sciences 776
Advanced Bioinformatics (Spring 2018)

General Course Information
Course Overview
Announcements
Syllabus, Readings, Lecture Notes
Schedule
Homework and Project
Past Semesters
DNA

Tentative Course Schedule

Week Date Subject Notes
1 1/23 Course Overview
1/25 Learning Motif Models
2 1/30 Learning Motif Models
2/1 Learning Motif Models HW0 out
3 2/6 Learning Motif Models
2/8 Learning CRM Models HW0 due, HW1 out
4 2/13 Learning CRM Models
2/15 Genotype Analysis
5 2/20 Genotype Analysis
2/22 Genotype Analysis HW1 due, HW2 out
6 2/27 Epigenomics
3/1 Epigenomics
7 3/6 Epigenomics
3/8 Epigenomics HW2 due
8 3/13 Midterm (in class)
3/15 Epigenomics
9 3/20 Epigenomics
3/22 RNA-Seq and Mass SpectrometryProposal due, HW3 out
Spring Break
10 4/3 RNA-Seq and Mass Spectrometry
4/5 RNA-Seq and Mass Spectrometry
11 4/10 Network Analysis
4/12 Network Analysis HW3 due
12 4/17 Gene Finding
4/19 Gene Finding Progress due, HW4 out
13 4/24 Large-scale Alignment
4/26 Large-scale Alignment
14 5/1 RNA Secondary Structure and SCFGs
5/3 RNA Secondary Structure and SCFGs HW4 due
5/9 Final exam
5/11 Project report due