During the course of my research in computational biology, I have written a fair amount of code that forms a couple of larger programs and numerous small utility programs. All of my code is available under the GNU General Public License and can be downloaded from this page. Included in my code are libraries written in C++ and Python that may be useful to others developing computational biology software. Many of the utility programs are inspired by Jim Kent's collection of programs written in C. Among the programs made available here are:

UW Crest
UW Biostatistics & Medical Informatics Computer Sciences Genome Center