Biostatistics & Medical Informatics 776
Computer Sciences 776
Advanced Bioinformatics (Spring 2017)

General Course Information
Course Overview
Announcements
Syllabus, Readings, Lecture Notes
Schedule
Homework and Project
Past Semesters
DNA

Tentative Course Schedule

Week Date Subject Notes
1 1/17 Course Overview
1/19 Learning Motif Models
2 1/24 Learning Motif Models
1/26 Learning Motif Models
3 1/31 Learning Motif Models
2/2 Learning CRM Models
4 2/7 Learning CRM Models
2/9 Genotype Analysis
5 2/14 Genotype Analysis
2/16 Genotype Analysis
6 2/21 Epigenomics
2/23 Epigenomics
7 2/28 Epigenomics
3/2 Epigenomics
8 3/7 Midterm (in class)
3/9 Epigenomics
9 3/14 RNA-Seq and Mass Spectrometry
3/16 RNA-Seq and Mass SpectrometryProject Proposal Due
Spring Break
10 3/28 RNA-Seq and Mass Spectrometry
3/30 RNA-Seq and Mass Spectrometry
11 4/4 Network Analysis
4/6 Network Analysis
12 4/11 Gene Finding
4/13 Gene Finding Project Progress Report Due
13 4/18 Large-scale Alignment
4/20 Large-scale Alignment
14 4/25 RNA Secondary Structure and SCFGs
4/27 RNA Secondary Structure and SCFGs
15 5/2 Protein Structure Prediction
5/4 Protein Structure Prediction
5/7 Final Exam
5/10 Project Report Due