| General Course Information |
| Course Overview |
| Announcements |
| Syllabus, Readings, Lecture Notes |
| Schedule |
| Homework and Project |
| Past Semesters |
|
General Course Information
- Instructor:
Daifeng Wang
Email:
Office : Waisman Center 517
Office for Office Hours: Medical Sciences Center 4750
Office Hours: Mon 11:00-12:00 am, Wed 11:00-12:00 am and Zoom (by appointments) - TAs:
Haotian Ma
Email:
Office for Office Hours: Medical Sciences Center 4750
Office Hours: Mon 5:00-6:00 pm, Wed 4:00-6:00 pm (by Zoom) (link) - Meeting Time and Location:
Monday and Wednesday, 9:30-10:45 AM
Engineering Hall 2305 - Prerequisite:
BMI/CS 576 - Readings:
- Most readings will be articles from the primary literature
- Recommended text: Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids. R. Durbin, S. Eddy, A. Krogh, and G. Mitchison. Cambridge University Press, 1998. (errata)
- Recommended online text: Translational Bioinformatics: a collection of PLoS Computational Biology. (Link)
- Suggested reference Python text: The Quick Python Book, Third Edition. N. Ceder. Manning Publications. 2018.
- Suggested reference papers: Machine learning articles within Nature Methods.
- Suggested reference papers: Focus on advanced AI in biology.
- Discussion Forum:
Piazza discussion forum - Midterm Exam:
Wednesday, March 19, in class - Final Exam:
Wednesday, May 7, 5:05 PM - 7:05 PM, 2637 Mosse Humanities Building